Incorporating biodiversity responses to land use change scenarios for preventing emerging zoonotic diseases in areas of unknown host-pathogen interactions.

The need to reconcile food production, the safeguarding of nature, and the protection of public health is imperative in a world of continuing global change, particularly in the context of risks of emerging zoonotic disease (EZD). In this paper, we explored potential land use strategies to reduce EZD risks using a landscape approach. We focused on strategies for cases where the dynamics of pathogen transmission among species were poorly known and the ideas of "land-use induced spillover" and "landscape immunity" could be used very broadly. We first modeled three different land-use change scenarios in a region of transition between the Cerrado and the Atlantic Forest biodiversity hotspots. The land-use strategies used to build our scenarios reflected different proportions of native vegetation cover, as a proxy of habitat availability. We then evaluated the effects of the proportion of native vegetation cover on the occupancy probability of a group of mammal species and analyzed how the different land-use scenarios might affect the distribution of species in the landscape and thus the risk of EZD. We demonstrate that these approaches can help identify potential future EZD risks, and can thus be used as decision-making tools by stakeholders, with direct implications for improving both environmental and socio-economic outcomes.

Impact of Iron Mining Activity on the Endophytic Fungal Community of Aspilia grazielae.

Aspilia grazielae (J. U. Santos) is an endemic plant species in Morro do Urucum in the Pantanal wetland (Brazil). A. grazielae is used for the restoration of areas impacted by iron mining activities. This study evaluates the diversity (composition, value and abundance) of endophytic fungal communities, considering parts of the plant and soil condition. The leaves and roots of A. grazielae were collected from native vegetation areas (NVA) and recovery areas (RCA) in Morro do Urucum. Illumina sequencing technology was used to investigate variation in endophytic fungal biodiversity. The operational taxonomic units detected in NVA ranged from 183 to 263 (leaf) and 115 to 285 (root), while RCA samples ranged from 200 to 282 (leaf) and 156 to 348 (root). Ascomycota phylum was the most common species among all plant samples. The most significant classes identified were Lecanoromycetes and Dothideomycetes that differed significantly (p ≤ 0.05) according to their plant hosts and soil stress. The relative abundance of Pestalotiopsis (Sordariomycetes class) and Stereocaulon (Lecanoromycetes class) genera was influenced by the iron mining activities according to the leaf samples analysed. However, the abundance and wealth of endophytic fungal communities in A. grazielae from RCA were evidence that could explain their high resilience to environmental disturbances and the source-sink dynamics of fungal propagules.

The SISBIOTA-Diptera Brazilian Network: A long-term survey of Diptera from unexplored Brazilian Western Arc of Amazon, Cerrado, and Pantanal

ABSTRACT The SISBIOTA-BRASIL was a three-year multimillion-dollar research program of the Brazilian government to document plants and animals in endangered/understudied areas and biomes in Brazil. Distributional patterns and the historical events that generated them are extensively unknown regarding Brazilian fauna and flora. This deficiency hinders the development of conservation policies and the understanding of evolutionary processes. Conservation decisions depend on precise knowledge of the taxonomy and geographic distribution of species. Given such a premise, we proposed to research the diversity of Diptera of the Brazilian western arc of Amazon, Cerrado, and Pantanal in the states of Mato Grosso, Mato Grosso do Sul, and Rondônia. Three important biomes of the South American continent characterize these Brazilian states: Amazon forest, Cerrado (Brazilian Savannah), and Pantanal. Besides their ecological relevance, these biomes historically lack intensive entomological surveys. Therefore, they are much underrepresented in the Brazilian natural history collections and in the scientific literature, which is further aggravated by the fact that these areas are being exponentially and rapidly converted to commercial lands. Our project involved over 90 collaborators from 24 different Brazilian institutions and one from Colombia among researchers, postdocs, graduate and undergraduate students, and technicians. We processed and analyzed nearly 300,000 specimens from ~60 families of Diptera collected with a large variety of methods in the sampled areas. Here, we provide a detailed overview of the genera and species diversity of 41 families treated. Our results point to a total of 2,130 species and 514 genera compiled and identified for the three states altogether, with an increase of 41% and 29% in the numbers of species and genera known for the three states combined, respectively. Overall, the 10 most species-rich families were Tachinidae, Cecidomyiidae, Tabanidae, Psychodidae, Sarcophagidae, Stratiomyidae, Bombyliidae, Syrphidae, Tephritidae, and Asilidae. The 10 most diverse in the number of genera were Tachinidae, Stratiomyidae, Asilidae, Mycetophilidae, Syrphidae, Tabanidae, Muscidae, Dolichopodidae, Sarcophagidae, and Chloropidae. So far, 111 scientific papers were published regarding taxonomic, phylogenetic, and biogeographical aspects of the studied families, with the description of 101 new species and three new genera. We expect that additional publications will result from this investigation because several specimens are now curated and being researched by specialists.

Identifying priority regions and territorial planning strategies for conserving native vegetation in the Cerrado (Brazil) under different scenarios of land use changes.

The Cerrado biome covers approximately 20% of Brazil and it is crucial for the Water, Food, Energy, and Ecosystems (WFEE) nexus. Thus, in recent years, large areas of the undisturbed Cerrado have been converted into farmland. In this biome, according to the Brazilian Forest Code, farmers need to keep 20% of native vegetation (Legal Reserves - LRs). By exploring combined and isolated impacts of different scenarios of LR and Protected area (PA) arrangements, this study evaluated the importance of complementarity between LR compliance and the amount of PAs (including Conservation Units - CUs and Indigenous Lands - ILs) to reduce deforestation and conserve native vegetation in the Cerrado. Seven scenarios were investigated: a scenario that considers the current PA and the LR values foreseen in the Native Vegetation Protection Law - NVPL; three scenarios focused on production; and three focused on conservation. Considering the trend of the current scenario, the estimated loss of native vegetation will be 30% (30.6 million ha) by 2070. According to the model simulations, for two periods (2050 and 2070), the LR Elimination scenario (LRE) would cause a greater loss of native vegetation than the PA Elimination (PAE), and as expected, the exclusion of both (PALRE) would provide a greater loss of native vegetation. Native vegetation is concentrated mainly on agricultural properties. Taking our conservation-oriented scenarios as an example of conservation strategies, if there were no financial, practical, political, social or personal constraints, there is no doubt that the CPALRI scenario (Creation of Protected Areas and Legal Reserve Increase) is the best trajectory for conserving biodiversity. Therefore, private properties, through LRs, are essential for efficient planning of land use/cover as they ensure security in the WFEE nexus. The resulting projected scenarios are important to help decision makers in territorial planning and how to arbitrate territorial demands aiming at the rational use of the natural resources of the Cerrado.

The importance of Legal Reserves for protecting the Pantanal biome and preventing agricultural losses.

Considering scenarios of future changes in land use have the potential to support policy-makers in drafting environmental laws to reconcile the demands of multiple land uses. The Pantanal, one of the largest wetlands in the world, has been undergoing rapid land use changes, and does not yet have any integrated environmental legislation on Legal Reserve for entire region (LR - minimum percentage of native vegetation required within private properties). The aim of this paper was to generate future vegetation loss scenarios for the Pantanal based on four LR values: (i) BAU: Business as usual, which considers existing laws: Native Vegetation Protection Law and State Decree; (ii) LRE: LR elimination owing to a bill recently proposed; (iii) LR50: which considers the bill proposing 50% of LR for the Pantanal; and (iv) LR80: our proposed levels of 80% of LR for the lowlands and 35% for the plateau (following values in the Amazon). Based on native vegetation loss from each scenario, we estimated the soil loss and sediment yield to rivers. Our results show that LRE would increase native vegetation loss in the Pantanal by as much as 139% when compared to the BAU, whereas increasing LR levels would reduce conversion values by 29% (LR80). Elimination of the LR would increase soil erosion and sediment production by up to 7% and 10%, respectively, compared to BAU. Based on native vegetation loss from each scenario, we estimated the soil loss and sediment yield to rivers with our data showing more than 90% of the sediment transported to the lowland originating from the plateau. The LR80 indicates a reduction in soil nutrient replacement costs of 10% compared to BAU, while in the LR50 these costs decrease by 1.5%, and in the LRE would increase of 8%. Our results show that abolishing current protections would have substantial impacts on avulsion processes, on several economic activities (tourism, fishery, cattle raising, etc.) and negative impacts for biodiversity conservation and would bring losses to agriculture in the Pantanal. Hence, our study brings clearly evidence of LR importance and need to expand it in this sensitive wetland.

Effects of macroconsumers on benthic communities: Rapid increases in dry-season accrual of calcium in a tropical karst stream.

Species loss from upper trophic levels can result in some major changes in community structure and ecosystem functions. Here, we experimentally excluded macroconsumers (e.g., fish and shrimp) in a Brazilian karst tropical stream during the dry season to investigate if their loss affected the accrual of calcium, dry mass (DM) and ash-free dry mass (AFDM) of sediment, benthic invertebrates, and chlorophyll-a. We found that the exclusion of macroconsumers decreased accrual of calcium. The absence of fish and shrimp may have promoted increased grazing by mayflies and snails in the electrified treatment as expressed by the depressed calcium accrual and shift in periphyton community composition. However, the exclusion of macroconsumers had no effect on DM and AFDM, chlorophyll-a, or total abundance of invertebrates. Our findings shed new light on the impact of macroconsumer loss and consequences for calcium accrual in karstic streams.

DNA Barcodes for Forensically Important Fly Species in Brazil.

Here, we analyze 248 DNA barcode sequences of 35 fly species of forensic importance in Brazil. DNA barcoding can be effectively used for specimen identification of these species, allowing the unambiguous identification of 31 species, an overall success rate of 88%. Our results show a high rate of success for molecular identification using DNA barcoding sequences and open new perspectives for immature species identification, a subject on which limited forensic investigations exist in Tropical regions. We also address the implications of building a robust forensic DNA barcode database. A geographic bias is recognized for the COI dataset available for forensically important fly species in Brazil, with concentration of sequences from specimens collected mainly in sites located in the Cerrado, Mata Atlântica, and Pampa biomes.

DNA barcoding of odonates from the Upper Plata basin: Database creation and genetic diversity estimation.

We present a DNA barcoding study of Neotropical odonates from the Upper Plata basin, Brazil. A total of 38 species were collected in a transition region of "Cerrado" and Atlantic Forest, both regarded as biological hotspots, and 130 cytochrome c oxidase subunit I (COI) barcodes were generated for the collected specimens. The distinct gap between intraspecific (0-2%) and interspecific variation (15% and above) in COI, and resulting separation of Barcode Index Numbers (BIN), allowed for successful identification of specimens in 94% of cases. The 6% fail rate was due to a shared BIN between two separate nominal species. DNA barcoding, based on COI, thus seems to be a reliable and efficient tool for identifying Neotropical odonate specimens down to the species level. These results underscore the utility of DNA barcoding to aid specimen identification in diverse biological hotspots, areas that require urgent action regarding taxonomic surveys and biodiversity conservation.

Odonates from Bodoquena Plateau: checklist and information about endangered species / Libélulas da Serra da Bodoquena: lista de espécies e informações sobre espécies ameaçadas

Abstract Here we provide an updated checklist of the odonates from Bodoquena Plateau, Mato Grosso do Sul state, Brazil. We registered 111 species from the region. The families with the highest number of species were Libellulidae (50 species), Coenagrionidae (43 species) and Gomphidae (12 species). 35 species are registered in the IUCN Red List species, four being Data Deficient, 29 of Least Concern and two species being in the threatened category. Phyllogomphoides suspectus Belle, 1994 (Odonata: Gomphidae) was registered for the first time in the state.

Resumo Nós apresentamos um inventário atualizado das espécies de libélulas ocorrentes na Serra da Bodoquena, Estado de Mato Grosso do Sul, Brasil. Nós registramos 111 espécies para a região. As famílias com o maior número de espécies foram Libellulidae (50 espécies), Coenagrionidae (43 espécies) e Gomphidae (12 espécies). 35 espécies são registradas na Lista Vermelha de espécies da IUCN e duas estão em categorias de ameaçadas. Phyllogomphoides suspectus Belle, 1994 (Odonata: Gomphidae) foi registrado pela primeira vez no estado.

New species and records of Oukuriella Epler, 1986 from the Neotropical region (Diptera: Chironomidae).

Two new species of Oukuriella, O. angelomachadoi sp. nov. (Holotype male deposited in MZUSP: BRAZIL, Paraná State) and O. plumaterata sp. nov. (Holotype male deposited in MZUSP: BRAZIL, São Paulo State), and the immatures stages of O. sublettei are described and figured. The larvae of O. sublettei were collected from submerged woods in low-order streams in the Atlantic Forest. In addition new records of several described species, including the first records of Oukuriella from Mexico and Bolivia are given.

What Shapes the Phylogenetic Structure of Anuran Communities in a Seasonal Environment? The Influence of Determinism at Regional Scale to Stochasticity or Antagonistic Forces at Local Scale.

Ecological communities are structured by both deterministic and stochastic processes. We investigated phylogenetic patterns at regional and local scales to understand the influences of seasonal processes in shaping the structure of anuran communities in the southern Pantanal wetland, Brazil. We assessed the phylogenetic structure at different scales, using the Net Relatedness Index (NRI), the Nearest Taxon Index (NTI), and phylobetadiversity indexes, as well as a permutation test, to evaluate the effect of seasonality. The anuran community was represented by a non-random set of species with a high degree of phylogenetic relatedness at the regional scale. However, at the local scale the phylogenetic structure of the community was weakly related with the seasonality of the system, indicating that oriented stochastic processes (e.g. colonization, extinction and ecological drift) and/or antagonist forces drive the structure of such communities in the southern Pantanal.

A comparative analysis reveals weak relationships between ecological factors and beta diversity of stream insect metacommunities at two spatial levels.

The hypotheses that beta diversity should increase with decreasing latitude and increase with spatial extent of a region have rarely been tested based on a comparative analysis of multiple datasets, and no such study has focused on stream insects. We first assessed how well variability in beta diversity of stream insect metacommunities is predicted by insect group, latitude, spatial extent, altitudinal range, and dataset properties across multiple drainage basins throughout the world. Second, we assessed the relative roles of environmental and spatial factors in driving variation in assemblage composition within each drainage basin. Our analyses were based on a dataset of 95 stream insect metacommunities from 31 drainage basins distributed around the world. We used dissimilarity-based indices to quantify beta diversity for each metacommunity and, subsequently, regressed beta diversity on insect group, latitude, spatial extent, altitudinal range, and dataset properties (e.g., number of sites and percentage of presences). Within each metacommunity, we used a combination of spatial eigenfunction analyses and partial redundancy analysis to partition variation in assemblage structure into environmental, shared, spatial, and unexplained fractions. We found that dataset properties were more important predictors of beta diversity than ecological and geographical factors across multiple drainage basins. In the within-basin analyses, environmental and spatial variables were generally poor predictors of variation in assemblage composition. Our results revealed deviation from general biodiversity patterns because beta diversity did not show the expected decreasing trend with latitude. Our results also call for reconsideration of just how predictable stream assemblages are along ecological gradients, with implications for environmental assessment and conservation decisions. Our findings may also be applicable to other dynamic systems where predictability is low.

Review of Xenochironomus Kieffer, 1921 (Diptera: Chironomidae) with description of six new species.

The genus Xenochironomus Kieffer is reviewed. Five new species are described from Brazil, X. alaidae, X. amazonensis and X. martini as male; X. grini and X. mendesi as male, pupa and larva, and X. ethiopensis from Ethiopia is described as adult male. X. canterburyensis (Freeman) is redescribed as male, pupa and larva; X. trochanteratus (Thompson), X. trisetosus (Kieffer), X. ugandae (Goetghebuer) and X. tuberosus Wang as males; notes on X. xenolabis (Kieffer), X. flaviventris (Kieffer), X. longicrus (Kieffer), X. lacertus Dutta et Chaudhuri and X. ceciliae Roque et Trivinho-Strixino are also given. The species X. nigricaudus Hashimoto is recognized as nomen dubium. Keys to males, pupae and larvae are presented.

Concordance between macroinvertebrate communities and the typological classification of white and clear-water streams in Western Brazilian Amazonia / Concordância entre comunidade de macroinvertebrados e classificação tipológica de igarapés em águas brancas e claras no oeste Amazônico, Brasil

In this study we have attempted to answer whether there is correspondence between aquatic macroinvertebrate communities and the typological classification of white and clean-water streams in western Amazonia lowlands. We worked within two distinct hydrographic basins: Moa River catchment (clear-water streams) and Azul River catchment (white-water streams) in Serra do Divisor National Park, Acre State, Brazil, sampling 10 streams in each basin. A total of 2,952 individuals were collected, distributed among 134 taxa. Our results show that macroinvertebrate communities, at genus as well as family level, are in concordance to a priori classifications that distinguish between white and clear water streams. The main implication of our results for biomonitoring is that biotic variation between white and clear streams can be partitioned regionally, which would improve the bioassessment accuracy of the Amazonian streams.

Neste trabalho, nós investigamos se há correspondência entre comunidade de macroinvertebrados e classificação de igarapés em águas claras e brancas no oeste da Amazônia. Nós trabalhos em duas bacias hidrográficas, Rio Moa (águas claras) e Rio Azul (águas brancas) no Parque Nacional da Serra do Divisor, Acre, Brasil, amostrando 10 igarapés em cada bacia. Coletamos 2952 indivíduos, distribuídos em 134 taxa. Nossos resultados mostram que a comunidade de macroinvertebrados, identificada com baixa e alta resolução taxonômica, responde claramente a classificação tipológica de igarapés em águas claras e brancas.A principal implicação dos nossos resultados no âmbito de biomonitoramento é que a partição da variação biótica entre igarapés de águas claras e brancas pode melhorar a racionalidade e implantação de sistemas de avaliação ambiental na Amazônia.

Occurrence of Chironomid larvae living inside fallen-fruits in Atlantic forest streams, Brazil

Larvas de Chironomidae exploram uma grande variedade de habitats e tipos de alimentos. Neste estudo, nós documentamos a ocorrência de larvas vivendo dentro de frutos caídos em córregos de baixa ordem na Mata Atlântica, Brasil. Nós encontramos larvas minando o tecido de frutos de 12 espécies de árvores. Sete morfoespécies de Endotribelos foram identificadas, incluindo as espécies E. albatum and E. grodhaus, encontradas pela primeira vez no Brasil. Os resultados indicam que larvas de Endotribelos constituem o grupo de insetos mais comum em frutos caídos em córregos da Mata Atlântica.

Species of Oukuriella Epler (Diptera, Chironomidae) inside freshwater sponges in Brazil

Espécies de Oukuriella Epler (Diptera, Chironomidae) no interior de esponjas de água doce no Brasil. Larvas de Oukuriella Epler, 1986 no interior de esponjas de água doce são registradas pela primeira vez no Brasil.

A review of chironomidae studies in lentic systems in the state of São Paulo, Brazil

Information on the chironomid fauna in lentic habitats in the State of São Paulo is gathered from the literature, and suggestions for future studies are provided.